bpca

bpca is an R package for biplot analysis based on principal components.

Features

PCA-based Biplot analysis in reduced-dimensional spaces (2D and 3D).
Multiple factorization methods (hj, sqrt, jk, gh) for different interpretations.
Quality diagnostics for dimensionality reduction and representation fidelity.
Reporting support with xtable(bpca(...)) and print(..., type = "html").

Installation

Install from CRAN:

install.packages("bpca")

Install the development version from GitHub:

# install.packages("remotes")
# remotes::install_github("jcfaria/bpca")
install.packages("bpca", repos = c('https://jcfaria.r-universe.dev', 'https://cloud.r-project.org'))

Quick example

library(bpca)

# Example with the classic iris dataset
bp <- bpca(iris[-5], d = 1:2)
plot(
  bp,
  var.col = "blue",
  var.factor = 2,
  main = "Biplot - Iris Dataset"
)

For more complete examples, see:

demo("bpca", package = "bpca")
vignette("bpca-overview", package = "bpca")

License

GPL-2. Author: José Cláudio Faria.

Author

Author: José Cláudio Faria · Universidade Estadual de Santa Cruz (UESC)

Project Layout

/R: Core computational and plotting functions.
/data: Example datasets shipped with the package.
/demo: Runnable demos illustrating usage.
/man: Documentation (.Rd files).
/inst: Extra package materials (e.g. citations).
/vignettes: Vignettes and tutorials.

Contributing

Contributions are welcome. Open an Issue or submit a Pull Request on github.com/jcfaria/bpca with:

Bug fixes and performance improvements.
Documentation and usability improvements.
New ideas for diagnostics and visualization workflows.

Roadmap

Expand test coverage for edge cases and plotting behavior.
Add practical vignettes with real-world datasets.
Improve CI signals and package quality checks.

Developed by:
Faria, J. C.; Allaman, I. B.
Universidade Estadual de Santa Cruz - UESC
Departamento de Ciências Exatas - DCEX
Ilhéus - Bahia - Brasil

Demétrio, C. G. B.
Universidade de São Paulo - USP
Escola Superior de Agricultura Luiz de Queiroz - ESALQ
Piracicaba - São Paulo - Brasil